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PGSC0003DMT400052829 PGSC0003DMT400052829 PGSC0003DMT400057281 PGSC0003DMT400057281 PGSC0003DMT400002421 PGSC0003DMT400002421 PGSC0003DMT400021871 PGSC0003DMT400021871 PGSC0003DMT400000866 PGSC0003DMT400000866 psbE psbE PGSC0003DMT400051899 PGSC0003DMT400051899 PGSC0003DMT400019490 PGSC0003DMT400019490
"PGSC0003DMT400000866" - Ultraviolet-B-repressible protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400000866Ultraviolet-B-repressible protein (120 aa)    
Predicted Functional Partners:
PGSC0003DMT400002421
Oxygen-evolving enhancer protein 2, chloroplastic (280 aa)
     
 
  0.727
PGSC0003DMT400051899
Photosystem II reaction center W protein, chloroplastic (132 aa)
     
 
  0.651
PGSC0003DMT400019490
Photosystem II reaction center W protein, chloroplastic (132 aa)
     
 
  0.651
PGSC0003DMT400021871
Chloroplast pigment-binding protein CP29 (285 aa)
     
      0.619
psbE
Cytochrome b559 subunit alpha; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water-plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation (83 aa)
       
 
  0.607
PGSC0003DMT400057281
Chloroplast photosystem I reaction center V (146 aa)
     
        0.479
PGSC0003DMT400052829
Photosystem I reaction center subunit X psaK (130 aa)
     
   
  0.463
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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