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PGSC0003DMT400003274 PGSC0003DMT400003274 PGSC0003DMT400070672 PGSC0003DMT400070672 PGSC0003DMT400027904 PGSC0003DMT400027904 PGSC0003DMT400009339 PGSC0003DMT400009339 PGSC0003DMT400001063 PGSC0003DMT400001063 PGSC0003DMT400073491 PGSC0003DMT400073491 PGSC0003DMT400019560 PGSC0003DMT400019560 PGSC0003DMT400014959 PGSC0003DMT400014959 PGSC0003DMT400065655 PGSC0003DMT400065655 PGSC0003DMT400011294 PGSC0003DMT400011294 PGSC0003DMT400009647 PGSC0003DMT400009647
"PGSC0003DMT400001063" - Inner membrane protein PPF-1, chloroplast in Solanum tuberosum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
PGSC0003DMT400001063Inner membrane protein PPF-1, chloroplast (448 aa)    
Predicted Functional Partners:
PGSC0003DMT400014959
Inner membrane protein (443 aa)
         
  0.898
PGSC0003DMT400070672
Protein translocase secy subunit (538 aa)
     
 
  0.871
PGSC0003DMT400027904
ALBINO3 1, chloroplastic (529 aa)
   
 
0.864
PGSC0003DMT400003274
Ankyrin repeat domain protein (372 aa)
     
 
  0.838
PGSC0003DMT400073491
Vacuolar membrane ATPase subunit c’’ (177 aa)
   
 
  0.826
PGSC0003DMT400065655
Vacuolar membrane ATPase subunit c’’ (179 aa)
   
 
  0.826
PGSC0003DMT400019560
Vacuolar membrane ATPase subunit c’’ (177 aa)
   
 
  0.826
PGSC0003DMT400011294
V-type proton ATPase 16 kDa proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (164 aa)
   
 
  0.826
PGSC0003DMT400009647
V-type proton ATPase 16 kDa proteolipid subunit c2; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (165 aa)
   
 
  0.826
PGSC0003DMT400009339
V-type proton ATPase 16 kDa proteolipid subunit c2 (165 aa)
   
 
  0.826
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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