Full Link:
STRINGSTRING
PGSC0003DMT400020461 PGSC0003DMT400020461 PGSC0003DMT400071381 PGSC0003DMT400071381 PGSC0003DMT400029925 PGSC0003DMT400029925 PGSC0003DMT400001202 PGSC0003DMT400001202 PGSC0003DMT400057197 PGSC0003DMT400057197 PGSC0003DMT400076175 PGSC0003DMT400076175 PGSC0003DMT400063942 PGSC0003DMT400063942 PGSC0003DMT400065030 PGSC0003DMT400065030 PGSC0003DMT400040876 PGSC0003DMT400040876 PGSC0003DMT400049180 PGSC0003DMT400049180 PGSC0003DMT400049176 PGSC0003DMT400049176
"PGSC0003DMT400001202" - Signal recognition particle receptor subunit beta in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400001202Signal recognition particle receptor subunit beta (261 aa)    
Predicted Functional Partners:
PGSC0003DMT400020461
Signal recognition particle receptor alpha subunit (619 aa)
   
  0.977
PGSC0003DMT400071381
Cell division protein ftsy (368 aa)
   
  0.934
PGSC0003DMT400063942
Shwachman-Bodian-Diamond syndrome protein (372 aa)
     
      0.654
PGSC0003DMT400076175
3-ketoacyl CoA thiolase 2 (465 aa)
     
      0.616
PGSC0003DMT400040876
3-ketoacyl CoA thiolase 1 (456 aa)
     
      0.616
PGSC0003DMT400065030
Arginine/serine rich splicing factor sf4/14 (435 aa)
       
      0.607
PGSC0003DMT400049176
Endoribonuclease (301 aa)
       
 
  0.576
PGSC0003DMT400029925
Endoribonuclease (757 aa)
       
 
  0.576
PGSC0003DMT400057197
Inducible plastid-lipid associated protein (172 aa)
       
 
  0.560
PGSC0003DMT400049180
Endoribonuclease (108 aa)
       
 
  0.560
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
Server load: low (2%)