Full Link:
STRINGSTRING
PGSC0003DMT400088624 PGSC0003DMT400088624 PGSC0003DMT400093372 PGSC0003DMT400093372 PGSC0003DMT400026038 PGSC0003DMT400026038 PGSC0003DMT400043694 PGSC0003DMT400043694 PGSC0003DMT400039976 PGSC0003DMT400039976 PGSC0003DMT400066478 PGSC0003DMT400066478 PGSC0003DMT400009588 PGSC0003DMT400009588 PGSC0003DMT400034355 PGSC0003DMT400034355 PGSC0003DMT400001287 PGSC0003DMT400001287 PGSC0003DMT400035591 PGSC0003DMT400035591 PGSC0003DMT400051560 PGSC0003DMT400051560
"PGSC0003DMT400001287" - Conserved gene of unknown function in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400001287Conserved gene of unknown function (119 aa)    
Predicted Functional Partners:
PGSC0003DMT400066478
Conserved gene of unknown function; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with PSMG1 (277 aa)
     
      0.949
PGSC0003DMT400039976
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH (273 aa)
     
      0.905
PGSC0003DMT400009588
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH (274 aa)
     
      0.905
PGSC0003DMT400043694
Proteasome subunit beta type (330 aa)
     
      0.897
PGSC0003DMT400034355
Proteasome subunit beta type (176 aa)
     
      0.897
PGSC0003DMT400026038
Proteasome maturation factor UMP1 family protein (141 aa)
     
 
  0.725
PGSC0003DMT400093372
Proteasome subunit beta type (237 aa)
     
      0.721
PGSC0003DMT400088624
Proteasome subunit beta type (209 aa)
     
      0.721
PGSC0003DMT400051560
Proteasome subunit beta type-6 (128 aa)
     
      0.721
PGSC0003DMT400035591
Proteasome subunit beta type-6; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (236 aa)
     
      0.721
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
Server load: low (2%)