Full Link:
STRINGSTRING
PGSC0003DMT400028571 PGSC0003DMT400028571 PGSC0003DMT400078229 PGSC0003DMT400078229 PGSC0003DMT400083089 PGSC0003DMT400083089 PGSC0003DMT400079665 PGSC0003DMT400079665 PGSC0003DMT400083940 PGSC0003DMT400083940 PGSC0003DMT400078706 PGSC0003DMT400078706 PGSC0003DMT400073281 PGSC0003DMT400073281 PGSC0003DMT400001454 PGSC0003DMT400001454 PGSC0003DMT400073122 PGSC0003DMT400073122 PGSC0003DMT400073277 PGSC0003DMT400073277 PGSC0003DMT400023046 PGSC0003DMT400023046
"PGSC0003DMT400001454" - ADP-ribosylation factor, arf in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400001454ADP-ribosylation factor, arf (193 aa)    
Predicted Functional Partners:
PGSC0003DMT400028571
Arf gtpase-activating protein (459 aa)
     
  0.913
PGSC0003DMT400023046
Arf gtpase-activating protein (467 aa)
     
  0.913
PGSC0003DMT400078229
Receptor protein kinase (1232 aa)
     
  0.913
PGSC0003DMT400083940
Serine-threonine protein kinase, plant-type (862 aa)
     
  0.912
PGSC0003DMT400083089
Brassinosteroid LRR receptor kinase (1106 aa)
     
  0.912
PGSC0003DMT400079665
Transmembrane protein kinase (748 aa)
     
  0.912
PGSC0003DMT400078706
Receptor protein kinase CLAVATA1 (1017 aa)
     
  0.912
PGSC0003DMT400073281
Conserved gene of unknown function (1160 aa)
     
  0.912
PGSC0003DMT400073277
Serine-threonine protein kinase, plant-type (1157 aa)
     
  0.912
PGSC0003DMT400073122
Conserved gene of unknown function (1143 aa)
     
  0.912
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
Server load: low (2%)