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PGSC0003DMT400081879 PGSC0003DMT400081879 PGSC0003DMT400050524 PGSC0003DMT400050524 PGSC0003DMT400080577 PGSC0003DMT400080577 PGSC0003DMT400069225 PGSC0003DMT400069225 PGSC0003DMT400055606 PGSC0003DMT400055606 PGSC0003DMT400010210 PGSC0003DMT400010210 PGSC0003DMT400001539 PGSC0003DMT400001539 PGSC0003DMT400022937 PGSC0003DMT400022937 PGSC0003DMT400002184 PGSC0003DMT400002184 PGSC0003DMT400028617 PGSC0003DMT400028617 PGSC0003DMT400026117 PGSC0003DMT400026117
"PGSC0003DMT400001539" - Conserved gene of unknown function in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400001539Conserved gene of unknown function (604 aa)    
Predicted Functional Partners:
PGSC0003DMT400028617
Protein kinase family protein (717 aa)
     
  0.990
PGSC0003DMT400022937
Kinase family protein (715 aa)
     
  0.990
PGSC0003DMT400010210
Serine/threonine-protein kinase (280 aa)
     
  0.990
PGSC0003DMT400026117
Conserved gene of unknown function (228 aa)
     
 
  0.942
PGSC0003DMT400002184
Armadillo repeat-containing protein (835 aa)
       
  0.908
PGSC0003DMT400080577
Autophagy protein 9 (868 aa)
     
 
  0.826
PGSC0003DMT400069225
Conserved gene of unknown function (606 aa)
         
 
0.800
PGSC0003DMT400050524
Autophagy protein (714 aa)
     
 
  0.762
PGSC0003DMT400081879
Cysteine protease ATG4B (524 aa)
     
 
  0.755
PGSC0003DMT400055606
Conserved gene of unknown function (313 aa)
     
 
  0.737
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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