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PGSC0003DMT400051081 PGSC0003DMT400051081 PGSC0003DMT400033541 PGSC0003DMT400033541 PGSC0003DMT400001588 PGSC0003DMT400001588 PGSC0003DMT400076236 PGSC0003DMT400076236 PGSC0003DMT400063174 PGSC0003DMT400063174
"PGSC0003DMT400001588" - PTAC15 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400001588PTAC15 (518 aa)    
Predicted Functional Partners:
PGSC0003DMT400033541
FZL (192 aa)
     
 
  0.513
PGSC0003DMT400063174
Pentatricopeptide repeat-containing protein, chloroplastic (860 aa)
     
 
  0.435
PGSC0003DMT400051081
Conserved gene of unknown function (302 aa)
     
   
  0.416
PGSC0003DMT400076236
Peptidoglycan binding domain containing protein (400 aa)
     
 
  0.415
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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