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PGSC0003DMT400074478 PGSC0003DMT400074478 PGSC0003DMT400047735 PGSC0003DMT400047735 PGSC0003DMT400001703 PGSC0003DMT400001703 PGSC0003DMT400040974 PGSC0003DMT400040974 PGSC0003DMT400060224 PGSC0003DMT400060224
"PGSC0003DMT400001703" - AP2 transcription factor in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400001703AP2 transcription factor (206 aa)    
Predicted Functional Partners:
PGSC0003DMT400074478
Charged multivesicular body protein 4b (218 aa)
           
  0.515
PGSC0003DMT400047735
Charged multivesicular body protein 4b (218 aa)
           
  0.515
PGSC0003DMT400040974
Charged multivesicular body protein 4b (1035 aa)
           
  0.405
PGSC0003DMT400060224
TSC13 protein (310 aa)
           
  0.403
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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