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PGSC0003DMT400068602 PGSC0003DMT400068602 PGSC0003DMT400004181 PGSC0003DMT400004181 PGSC0003DMT400074637 PGSC0003DMT400074637 PGSC0003DMT400062273 PGSC0003DMT400062273 CPA CPA PGSC0003DMT400023446 PGSC0003DMT400023446 PGSC0003DMT400001745 PGSC0003DMT400001745 PGSC0003DMT400013262 PGSC0003DMT400013262 PGSC0003DMT400031618 PGSC0003DMT400031618 PGSC0003DMT400050357 PGSC0003DMT400050357 PGSC0003DMT400013266 PGSC0003DMT400013266
"PGSC0003DMT400001745" - Agmatine deiminase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400001745Agmatine deiminase (375 aa)    
Predicted Functional Partners:
CPA
N-carbamoylputrescine amidase; Involved in polyamine biosynthesis (300 aa)
   
  0.997
PGSC0003DMT400068602
Arginine decarboxylase (720 aa)
       
  0.971
PGSC0003DMT400004181
Arginine decarboxylase (735 aa)
       
  0.971
PGSC0003DMT400074637
Beta-ureidopropionase (410 aa)
 
   
  0.759
PGSC0003DMT400050357
Carbon-nitrogen hydrolase family protein (355 aa)
       
  0.724
PGSC0003DMT400013266
Carbon-nitrogen hydrolase family protein (305 aa)
       
  0.724
PGSC0003DMT400013262
Carbon-nitrogen hydrolase family protein (229 aa)
       
  0.724
PGSC0003DMT400031618
Carbon-nitrogen hydrolase family protein (731 aa)
       
  0.718
PGSC0003DMT400023446
Spermine synthase (354 aa)
         
  0.685
PGSC0003DMT400062273
Spermidine synthase 1 (309 aa)
         
  0.667
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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