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PGSC0003DMT400070806 PGSC0003DMT400070806 PGSC0003DMT400077569 PGSC0003DMT400077569 PGSC0003DMT400054667 PGSC0003DMT400054667 PGSC0003DMT400069313 PGSC0003DMT400069313 PGSC0003DMT400062439 PGSC0003DMT400062439 PGSC0003DMT400079716 PGSC0003DMT400079716 PGSC0003DMT400001805 PGSC0003DMT400001805 PGSC0003DMT400069459 PGSC0003DMT400069459 PGSC0003DMT400054669 PGSC0003DMT400054669 PGSC0003DMT400058471 PGSC0003DMT400058471 PGSC0003DMT400054661 PGSC0003DMT400054661
"PGSC0003DMT400001805" - Dicer-1 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400001805Dicer-1 (293 aa)    
Predicted Functional Partners:
PGSC0003DMT400079716
AGO1-1 (1127 aa)
     
  0.882
PGSC0003DMT400077569
Eukaryotic translation initiation factor 2c (959 aa)
     
  0.882
PGSC0003DMT400070806
Eukaryotic translation initiation factor 2c (292 aa)
     
  0.882
PGSC0003DMT400069459
AGO4-1 (913 aa)
     
  0.882
PGSC0003DMT400069313
ARGONAUTE 1 (1054 aa)
     
  0.882
PGSC0003DMT400062439
Eukaryotic translation initiation factor 2c (1002 aa)
     
  0.882
PGSC0003DMT400058471
AGO4-2 (909 aa)
     
  0.882
PGSC0003DMT400054669
Argonaute protein group (1051 aa)
     
  0.882
PGSC0003DMT400054667
Argonaute protein group (730 aa)
     
  0.882
PGSC0003DMT400054661
Argonaute protein group (980 aa)
     
  0.882
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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