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PGSC0003DMT400020654 PGSC0003DMT400020654 PGSC0003DMT400009624 PGSC0003DMT400009624 PGSC0003DMT400001896 PGSC0003DMT400001896 PGSC0003DMT400026509 PGSC0003DMT400026509 PGSC0003DMT400066566 PGSC0003DMT400066566 PGSC0003DMT400026505 PGSC0003DMT400026505
"PGSC0003DMT400001896" - Isoform 2 of F-box protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400001896Isoform 2 of F-box protein (656 aa)    
Predicted Functional Partners:
PGSC0003DMT400066566
Cysteine protease (470 aa)
       
 
  0.475
PGSC0003DMT400026509
Cysteine protease Cp5 (505 aa)
       
 
  0.475
PGSC0003DMT400026505
Cysteine protease (508 aa)
       
 
  0.475
PGSC0003DMT400020654
Cysteine protease (443 aa)
       
 
  0.475
PGSC0003DMT400009624
Cysteine protease (439 aa)
       
 
  0.475
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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