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PGSC0003DMT400043415 PGSC0003DMT400043415 PGSC0003DMT400047623 PGSC0003DMT400047623 PGSC0003DMT400042008 PGSC0003DMT400042008 kb1 kb1 PGSC0003DMT400016819 PGSC0003DMT400016819 PGSC0003DMT400001948 PGSC0003DMT400001948 PGSC0003DMT400042838 PGSC0003DMT400042838 PGSC0003DMT400016815 PGSC0003DMT400016815 PGSC0003DMT400016488 PGSC0003DMT400016488 PGSC0003DMT400019146 PGSC0003DMT400019146 PGSC0003DMT400041157 PGSC0003DMT400041157
"PGSC0003DMT400001948" - Cyclic nucleotide-gated ion channel in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
PGSC0003DMT400001948Cyclic nucleotide-gated ion channel (236 aa)    
Predicted Functional Partners:
PGSC0003DMT400042838
Aldo/keto reductase AKR (449 aa)
       
  0.612
PGSC0003DMT400047623
Aldo/keto reductase (370 aa)
       
  0.606
kb1
Beta-subunit of K+ channels (330 aa)
       
  0.606
PGSC0003DMT400043415
Oxidoreductase, aldo/keto reductase family protein (359 aa)
       
  0.606
PGSC0003DMT400042008
Oxidoreductase (400 aa)
       
  0.606
PGSC0003DMT400041157
Aldo/keto reductase (367 aa)
       
  0.606
PGSC0003DMT400019146
Aldo-keto reductase (396 aa)
       
  0.606
PGSC0003DMT400016819
Aldo/keto reductase AKR (198 aa)
       
  0.606
PGSC0003DMT400016815
Aldo/keto reductase 2 (124 aa)
       
  0.606
PGSC0003DMT400016488
Aldo/keto reductase (241 aa)
       
  0.606
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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