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PGSC0003DMT400024048 PGSC0003DMT400024048 PGSC0003DMT400072954 PGSC0003DMT400072954 PGSC0003DMT400055082 PGSC0003DMT400055082 PGSC0003DMT400008133 PGSC0003DMT400008133 PGSC0003DMT400059968 PGSC0003DMT400059968 PGSC0003DMT400002126 PGSC0003DMT400002126 PGSC0003DMT400066521 PGSC0003DMT400066521 PGSC0003DMT400036661 PGSC0003DMT400036661 PGSC0003DMT400079915 PGSC0003DMT400079915 PGSC0003DMT400026512 PGSC0003DMT400026512 PGSC0003DMT400031814 PGSC0003DMT400031814
"PGSC0003DMT400002126" - Methionine aminopeptidase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400002126Methionine aminopeptidase (360 aa)    
Predicted Functional Partners:
PGSC0003DMT400036661
Prli-interacting factor l (454 aa)
     
 
  0.859
PGSC0003DMT400072954
Conserved gene of unknown function (371 aa)
     
 
  0.844
PGSC0003DMT400024048
Prli-interacting factor l (424 aa)
     
 
  0.844
PGSC0003DMT400059968
Phenylalanyl-tRNA synthetase (434 aa)
   
   
  0.797
PGSC0003DMT400066521
Phosphoribosylformylglycinamidine synthase (914 aa)
   
   
  0.779
PGSC0003DMT400026512
Phosphoribosylformylglycinamidine synthase (1410 aa)
   
   
  0.779
PGSC0003DMT400008133
Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (1050 aa)
   
 
  0.732
PGSC0003DMT400031814
GMP synthase (536 aa)
   
   
  0.688
PGSC0003DMT400055082
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (452 aa)
     
 
  0.684
PGSC0003DMT400079915
Utp-glucose-1-phosphate uridylyltransferase (410 aa)
   
   
  0.680
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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