Full Link:
STRINGSTRING
PGSC0003DMT400025104 PGSC0003DMT400025104 PGSC0003DMT400007724 PGSC0003DMT400007724 PGSC0003DMT400002277 PGSC0003DMT400002277 PGSC0003DMT400056462 PGSC0003DMT400056462 PGSC0003DMT400078190 PGSC0003DMT400078190 PGSC0003DMT400051327 PGSC0003DMT400051327 PGSC0003DMT400004094 PGSC0003DMT400004094 PGSC0003DMT400012014 PGSC0003DMT400012014 PGSC0003DMT400037338 PGSC0003DMT400037338 PGSC0003DMT400020747 PGSC0003DMT400020747 PGSC0003DMT400021030 PGSC0003DMT400021030
"PGSC0003DMT400002277" - Quinonprotein alcohol dehydrogenase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400002277Quinonprotein alcohol dehydrogenase (362 aa)    
Predicted Functional Partners:
PGSC0003DMT400078190
Sorting and assembly machinery (Sam50) protein (838 aa)
     
 
  0.923
PGSC0003DMT400021030
Sorting and assembly machinery (Sam50) protein (700 aa)
     
 
  0.923
PGSC0003DMT400020747
Sorting and assembly machinery (Sam50) protein (524 aa)
     
 
  0.923
PGSC0003DMT400007724
Conserved gene of unknown function (360 aa)
     
 
  0.923
PGSC0003DMT400012014
Parvulin-type peptidyl prolyl cis/trans isomerase (236 aa)
       
 
  0.679
PGSC0003DMT400056462
Rotamase (145 aa)
       
 
  0.572
PGSC0003DMT400051327
Peptidyl-prolyl cis-trans isomerase Pin1 (127 aa)
       
 
  0.572
PGSC0003DMT400004094
Peptidyl-prolyl cis-trans isomerase Pin1 (118 aa)
       
 
  0.572
PGSC0003DMT400025104
Ferredoxin-dependent glutamate synthase 1 (1621 aa)
           
  0.515
PGSC0003DMT400037338
GTP-binding protein enga (579 aa)
   
 
  0.427
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
Server load: low (2%)