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PGSC0003DMT400043433 PGSC0003DMT400043433 PGSC0003DMT400092002 PGSC0003DMT400092002 PGSC0003DMT400074382 PGSC0003DMT400074382 PGSC0003DMT400088980 PGSC0003DMT400088980 PGSC0003DMT400088590 PGSC0003DMT400088590 PGSC0003DMT400002293 PGSC0003DMT400002293 PGSC0003DMT400074385 PGSC0003DMT400074385 PGSC0003DMT400005785 PGSC0003DMT400005785 PGSC0003DMT400050157 PGSC0003DMT400050157 PGSC0003DMT400074381 PGSC0003DMT400074381 PGSC0003DMT400048849 PGSC0003DMT400048849
"PGSC0003DMT400002293" - White-brown-complex ABC transporter family in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400002293White-brown-complex ABC transporter family (603 aa)    
Predicted Functional Partners:
PGSC0003DMT400092002
ATP-binding cassette transporter (171 aa)
   
  0.756
PGSC0003DMT400088980
PDR8/PEN3 (PLEIOTROPIC DRUG RESISTANCE8) (115 aa)
   
  0.756
PGSC0003DMT400088590
PDR-like ABC transporter (95 aa)
   
  0.756
PGSC0003DMT400074385
ATP-binding cassette transporter (69 aa)
   
  0.756
PGSC0003DMT400074382
ATP-binding cassette transporter (112 aa)
   
  0.756
PGSC0003DMT400074381
ATP-binding cassette transporter (98 aa)
   
  0.756
PGSC0003DMT400050157
ABC transporter G family member 34 (219 aa)
   
  0.756
PGSC0003DMT400048849
ATPDR11/PDR11 (113 aa)
   
  0.756
PGSC0003DMT400043433
PDR-type ABC transporter 2 (152 aa)
   
  0.756
PGSC0003DMT400005785
ATP-binding cassette transporter (625 aa)
0.689
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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