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PGSC0003DMT400044026 PGSC0003DMT400044026 PGSC0003DMT400096032 PGSC0003DMT400096032 PGSC0003DMT400080350 PGSC0003DMT400080350 PGSC0003DMT400090967 PGSC0003DMT400090967 PGSC0003DMT400090149 PGSC0003DMT400090149 PGSC0003DMT400002331 PGSC0003DMT400002331 PGSC0003DMT400086481 PGSC0003DMT400086481 PGSC0003DMT400003364 PGSC0003DMT400003364 PGSC0003DMT400064699 PGSC0003DMT400064699 PGSC0003DMT400078778 PGSC0003DMT400078778 PGSC0003DMT400050271 PGSC0003DMT400050271
"PGSC0003DMT400002331" - Calcium-dependent protein kinase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400002331Calcium-dependent protein kinase (505 aa)    
Predicted Functional Partners:
PGSC0003DMT400090149
Protein phosphatase 2c (332 aa)
     
 
  0.903
PGSC0003DMT400064699
Calcium-binding EF hand family protein (193 aa)
     
  0.824
PGSC0003DMT400003364
Calcium ion binding protein (187 aa)
     
  0.824
PGSC0003DMT400096032
Regulator of gene silencing (183 aa)
       
  0.824
PGSC0003DMT400090967
Regulator of gene silencing (161 aa)
       
  0.824
PGSC0003DMT400086481
EF hand family protein (89 aa)
       
  0.824
PGSC0003DMT400080350
Calcium-binding protein CML22 (237 aa)
       
  0.824
PGSC0003DMT400078778
Polcalcin Nic t 1 (84 aa)
       
  0.824
PGSC0003DMT400050271
Calcium ion binding protein (207 aa)
       
  0.824
PGSC0003DMT400044026
Calcium-binding EF hand family protein (186 aa)
       
  0.824
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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