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PGSC0003DMT400001803 PGSC0003DMT400001803 PGSC0003DMT400007127 PGSC0003DMT400007127 PGSC0003DMT400042369 PGSC0003DMT400042369 PGSC0003DMT400002350 PGSC0003DMT400002350 PGSC0003DMT400078146 PGSC0003DMT400078146 PGSC0003DMT400077604 PGSC0003DMT400077604 PGSC0003DMT400036907 PGSC0003DMT400036907 PGSC0003DMT400046034 PGSC0003DMT400046034 PGSC0003DMT400060449 PGSC0003DMT400060449 PGSC0003DMT400027038 PGSC0003DMT400027038 PGSC0003DMT400026571 PGSC0003DMT400026571
"PGSC0003DMT400002350" - LysM domain GPI-anchored protein 1 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
PGSC0003DMT400002350LysM domain GPI-anchored protein 1 (413 aa)    
Predicted Functional Partners:
PGSC0003DMT400042369
Receptor protein kinase (622 aa)
           
  0.515
PGSC0003DMT400007127
Pentatricopeptide repeat-containing protein (605 aa)
           
  0.515
PGSC0003DMT400001803
Receptor protein kinase (626 aa)
           
  0.515
PGSC0003DMT400078146
60S ribosomal protein L35 (123 aa)
           
  0.400
PGSC0003DMT400077604
60S ribosomal protein L35 (123 aa)
           
  0.400
PGSC0003DMT400060449
60S ribosomal protein L35 (123 aa)
           
  0.400
PGSC0003DMT400046034
Potassium transporter 11; Potassium transporter (784 aa)
           
  0.400
PGSC0003DMT400036907
Ebna2 binding protein P100 (978 aa)
           
  0.400
PGSC0003DMT400027038
Potassium transporter 11; Potassium transporter (792 aa)
           
  0.400
PGSC0003DMT400026571
Arsenical pump-driving atpase; ATPase required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail- anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is require [...] (362 aa)
           
  0.400
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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