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PHA1 PHA1 PGSC0003DMT400088585 PGSC0003DMT400088585 PGSC0003DMT400041591 PGSC0003DMT400041591 PGSC0003DMT400083890 PGSC0003DMT400083890 PGSC0003DMT400074817 PGSC0003DMT400074817 DXS1 DXS1 PGSC0003DMT400002382 PGSC0003DMT400002382 PGSC0003DMT400080209 PGSC0003DMT400080209 PGSC0003DMT400014444 PGSC0003DMT400014444 PGSC0003DMT400065168 PGSC0003DMT400065168 PGSC0003DMT400070750 PGSC0003DMT400070750
"PGSC0003DMT400002382" - Penicillin-binding protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
PGSC0003DMT400002382Penicillin-binding protein (192 aa)    
Predicted Functional Partners:
PGSC0003DMT400074817
1-deoxyxylulose-5-phosphate synthase (190 aa)
     
 
  0.639
DXS1
1-D-deoxyxylulose 5-phosphate synthase (719 aa)
     
 
  0.639
PGSC0003DMT400041591
1-deoxy-D-xylulose 5-phosphate synthase 2 (720 aa)
     
 
  0.639
PGSC0003DMT400014444
UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (443 aa)
 
   
  0.564
PGSC0003DMT400088585
Plasma membrane proton ATPase (966 aa)
       
      0.551
PGSC0003DMT400083890
Phospholipid-transporting ATPase (1207 aa)
       
      0.551
PHA1
Plasma membrane H+-ATPase (956 aa)
       
      0.551
PGSC0003DMT400080209
Phospholipid-transporting atpase (738 aa)
       
      0.551
PGSC0003DMT400070750
Cation-transporting atpase 13a1 (1178 aa)
       
      0.551
PGSC0003DMT400065168
Plasma membrane ATPase 1 (990 aa)
       
      0.551
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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