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PGSC0003DMT400040683 PGSC0003DMT400040683 PGSC0003DMT400065617 PGSC0003DMT400065617 PGSC0003DMT400078736 PGSC0003DMT400078736 PGSC0003DMT400002583 PGSC0003DMT400002583 PGSC0003DMT400026957 PGSC0003DMT400026957 PGSC0003DMT400043378 PGSC0003DMT400043378 PGSC0003DMT400078369 PGSC0003DMT400078369
"PGSC0003DMT400002583" - Mitochondrial glycoprotein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400002583Mitochondrial glycoprotein (229 aa)    
Predicted Functional Partners:
PGSC0003DMT400043378
WD-repeat protein (272 aa)
       
      0.815
PGSC0003DMT400078736
Anti-silencing protein (193 aa)
       
      0.520
PGSC0003DMT400078369
Histone chaperone ASF1A (194 aa)
       
      0.520
PGSC0003DMT400026957
Silencing group A protein (181 aa)
       
      0.520
PGSC0003DMT400065617
Elongation factor 1-gamma (414 aa)
     
   
  0.423
PGSC0003DMT400040683
Elongation factor 1-gamma (413 aa)
     
   
  0.423
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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