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STRINGSTRING
PGSC0003DMT400034927 PGSC0003DMT400034927 PGSC0003DMT400096032 PGSC0003DMT400096032 PGSC0003DMT400078778 PGSC0003DMT400078778 PGSC0003DMT400090967 PGSC0003DMT400090967 PGSC0003DMT400086481 PGSC0003DMT400086481 CDPK7 CDPK7 PGSC0003DMT400080350 PGSC0003DMT400080350 PGSC0003DMT400027581 PGSC0003DMT400027581 PGSC0003DMT400050271 PGSC0003DMT400050271 PGSC0003DMT400064699 PGSC0003DMT400064699 PGSC0003DMT400044026 PGSC0003DMT400044026
"CDPK7" - Calcium-dependent protein kinase 3 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDPK7Calcium-dependent protein kinase 3 (578 aa)    
Predicted Functional Partners:
PGSC0003DMT400096032
Regulator of gene silencing (183 aa)
       
  0.824
PGSC0003DMT400090967
Regulator of gene silencing (161 aa)
       
  0.824
PGSC0003DMT400086481
EF hand family protein (89 aa)
       
  0.824
PGSC0003DMT400080350
Calcium-binding protein CML22 (237 aa)
       
  0.824
PGSC0003DMT400078778
Polcalcin Nic t 1 (84 aa)
       
  0.824
PGSC0003DMT400064699
Calcium-binding EF hand family protein (193 aa)
       
  0.824
PGSC0003DMT400050271
Calcium ion binding protein (207 aa)
       
  0.824
PGSC0003DMT400044026
Calcium-binding EF hand family protein (186 aa)
       
  0.824
PGSC0003DMT400034927
Polcalcin Jun o (140 aa)
       
  0.824
PGSC0003DMT400027581
Calcium-binding allergen Ole e (216 aa)
       
  0.824
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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