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PGSC0003DMT400060032 PGSC0003DMT400060032 PGSC0003DMT400065320 PGSC0003DMT400065320 PGSC0003DMT400018063 PGSC0003DMT400018063 PGSC0003DMT400077570 PGSC0003DMT400077570 PGSC0003DMT400056917 PGSC0003DMT400056917 PGSC0003DMT400052651 PGSC0003DMT400052651 PGSC0003DMT400065314 PGSC0003DMT400065314 PGSC0003DMT400078207 PGSC0003DMT400078207 PGSC0003DMT400002636 PGSC0003DMT400002636 PGSC0003DMT400021038 PGSC0003DMT400021038 PGSC0003DMT400011736 PGSC0003DMT400011736
"PGSC0003DMT400002636" - DNA polymerase eta in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400002636DNA polymerase eta (400 aa)    
Predicted Functional Partners:
PGSC0003DMT400078207
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
     
  0.987
PGSC0003DMT400011736
Ubiquitin extension protein (181 aa)
       
  0.955
PGSC0003DMT400065320
DNA repair protein RAD51 homolog 2 (69 aa)
   
  0.894
PGSC0003DMT400065314
DNA repair protein RAD51 homolog 2 (219 aa)
   
  0.894
PGSC0003DMT400060032
DNA repair protein recA homolog 3, mitochondrial (461 aa)
   
  0.894
PGSC0003DMT400056917
Replicase (419 aa)
   
  0.894
PGSC0003DMT400021038
RecA protein (361 aa)
   
  0.894
PGSC0003DMT400052651
DNA repair protein XRCC3 homolog (287 aa)
   
  0.880
PGSC0003DMT400077570
DMC1 (341 aa)
   
  0.875
PGSC0003DMT400018063
DNA repair and recombination protein radA (365 aa)
   
  0.875
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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