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PGSC0003DMT400013022 PGSC0003DMT400013022 apsr1 apsr1 PGSC0003DMT400051168 PGSC0003DMT400051168 PGSC0003DMT400010988 PGSC0003DMT400010988 PGSC0003DMT400079862 PGSC0003DMT400079862 PGSC0003DMT400013692 PGSC0003DMT400013692 PGSC0003DMT400080641 PGSC0003DMT400080641 PGSC0003DMT400021511 PGSC0003DMT400021511 PGSC0003DMT400002719 PGSC0003DMT400002719 PGSC0003DMT400042449 PGSC0003DMT400042449 PGSC0003DMT400054458 PGSC0003DMT400054458
"PGSC0003DMT400002719" - Thioredoxin domain-containing protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400002719Thioredoxin domain-containing protein (481 aa)    
Predicted Functional Partners:
PGSC0003DMT400042449
Derlin-2; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (245 aa)
     
      0.596
PGSC0003DMT400080641
Coatomer subunit epsilon-1 (291 aa)
     
 
  0.541
PGSC0003DMT400054458
Coatomer subunit epsilon-1 (291 aa)
     
 
  0.541
PGSC0003DMT400079862
Endoplasmic oxidoreductin-1 (478 aa)
       
 
  0.534
PGSC0003DMT400010988
Endoplasmic oxidoreductin 1 (273 aa)
       
 
  0.534
PGSC0003DMT400013692
Alpha-glucosidase (924 aa)
     
      0.529
PGSC0003DMT400021511
Alpha-xylosidase (847 aa)
     
      0.528
PGSC0003DMT400051168
Adenylyl-sulfate reductase (459 aa)
     
 
  0.431
apsr1
Adenylyl-sulfate reductase (460 aa)
     
 
  0.431
PGSC0003DMT400013022
Adenylyl-sulfate reductase (456 aa)
     
 
  0.431
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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