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PGSC0003DMT400060288 PGSC0003DMT400060288 PGSC0003DMT400019453 PGSC0003DMT400019453 PGSC0003DMT400002816 PGSC0003DMT400002816 PGSC0003DMT400018798 PGSC0003DMT400018798 PGSC0003DMT400079736 PGSC0003DMT400079736 PGSC0003DMT400061795 PGSC0003DMT400061795 PGSC0003DMT400091279 PGSC0003DMT400091279 PGSC0003DMT400023336 PGSC0003DMT400023336 SXD1 SXD1 PGSC0003DMT400025712 PGSC0003DMT400025712 PGSC0003DMT400047871 PGSC0003DMT400047871
"PGSC0003DMT400002816" - Transporter in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400002816Transporter (494 aa)    
Predicted Functional Partners:
PGSC0003DMT400023336
CP12 (124 aa)
   
          0.508
PGSC0003DMT400061795
Conserved gene of unknown function (172 aa)
   
          0.507
PGSC0003DMT400079736
Conserved gene of unknown function (368 aa)
   
          0.502
PGSC0003DMT400060288
Cleft lip and palate transmembrane protein (600 aa)
           
  0.499
PGSC0003DMT400019453
Conserved gene of unknown function (239 aa)
   
          0.499
PGSC0003DMT400018798
CP12 (126 aa)
   
          0.499
PGSC0003DMT400047871
Binding protein (352 aa)
   
          0.495
PGSC0003DMT400025712
Conserved gene of unknown function (122 aa)
   
          0.491
PGSC0003DMT400091279
Chloroplast lumen common family protein (310 aa)
   
          0.479
SXD1
Tocopherol cyclase (501 aa)
   
          0.478
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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