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jamyc10 jamyc10 jamyc2 jamyc2 PGSC0003DMT400075155 PGSC0003DMT400075155 PPS3 PPS3 PGSC0003DMT400002985 PGSC0003DMT400002985 PGSC0003DMT400081778 PGSC0003DMT400081778 PGSC0003DMT400016580 PGSC0003DMT400016580 PGSC0003DMT400074101 PGSC0003DMT400074101 PGSC0003DMT400007592 PGSC0003DMT400007592 PGSC0003DMT400018046 PGSC0003DMT400018046 PGSC0003DMT400000652 PGSC0003DMT400000652
"PGSC0003DMT400002985" - Conserved gene of unknown function in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400002985Conserved gene of unknown function (116 aa)    
Predicted Functional Partners:
PGSC0003DMT400016580
Protein TIFY 9 (171 aa)
     
 
  0.975
PGSC0003DMT400007592
Jasmonate ZIM-domain protein 1 (254 aa)
     
 
  0.969
PGSC0003DMT400074101
Gene of unknown function (253 aa)
       
 
  0.959
PPS3
Conserved gene of unknown function (390 aa)
       
 
  0.959
PGSC0003DMT400081778
Jasmonate ZIM-domain protein 3 (338 aa)
       
 
  0.940
jamyc2
MYC transcription factor (694 aa)
       
 
  0.930
PGSC0003DMT400075155
Gene of unknown function (215 aa)
     
 
  0.911
PGSC0003DMT400018046
Myc2 bHLH protein (578 aa)
       
 
  0.677
jamyc10
MYC transcription factor (598 aa)
       
 
  0.677
PGSC0003DMT400000652
Myc2 bHLH protein (598 aa)
       
 
  0.677
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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