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PGSC0003DMT400054570 PGSC0003DMT400054570 PGSC0003DMT400001225 PGSC0003DMT400001225 PGSC0003DMT400072406 PGSC0003DMT400072406 PGSC0003DMT400033116 PGSC0003DMT400033116 PGSC0003DMT400003012 PGSC0003DMT400003012 PGSC0003DMT400025551 PGSC0003DMT400025551 PGSC0003DMT400045761 PGSC0003DMT400045761 PGSC0003DMT400001077 PGSC0003DMT400001077 PGSC0003DMT400003801 PGSC0003DMT400003801 PGSC0003DMT400023621 PGSC0003DMT400023621 PGSC0003DMT400018358 PGSC0003DMT400018358
"PGSC0003DMT400003012" - Conserved gene of unknown function in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400003012Conserved gene of unknown function (620 aa)    
Predicted Functional Partners:
PGSC0003DMT400072406
Brix domain containing protein (317 aa)
     
      0.998
PGSC0003DMT400054570
Dead box ATP-dependent RNA helicase (587 aa)
     
      0.998
PGSC0003DMT400045761
Peroxidase 31 (747 aa)
     
      0.998
PGSC0003DMT400025551
Dead box ATP-dependent RNA helicase (745 aa)
     
      0.998
PGSC0003DMT400023621
Slow walker 2 (621 aa)
     
      0.998
PGSC0003DMT400003801
DEAD-box ATP-dependent RNA helicase 13 (797 aa)
     
      0.998
PGSC0003DMT400018358
RNA binding protein (217 aa)
     
      0.998
PGSC0003DMT400001225
RNA binding protein (216 aa)
     
      0.998
PGSC0003DMT400033116
Ribosome biogenesis protein brix (312 aa)
     
      0.998
PGSC0003DMT400001077
RNA processing factor 1 (355 aa)
     
      0.998
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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