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PGSC0003DMT400013351 PGSC0003DMT400013351 PGSC0003DMT400095716 PGSC0003DMT400095716 PGSC0003DMT400063726 PGSC0003DMT400063726 PGSC0003DMT400094391 PGSC0003DMT400094391 PGSC0003DMT400094045 PGSC0003DMT400094045 PGSC0003DMT400003310 PGSC0003DMT400003310 PGSC0003DMT400071544 PGSC0003DMT400071544 PGSC0003DMT400011783 PGSC0003DMT400011783 PGSC0003DMT400030445 PGSC0003DMT400030445 PGSC0003DMT400061821 PGSC0003DMT400061821 PGSC0003DMT400030418 PGSC0003DMT400030418
"PGSC0003DMT400003310" - Pectate lyase P59 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400003310Pectate lyase P59 (446 aa)    
Predicted Functional Partners:
PGSC0003DMT400013351
Pectinesterase (386 aa)
   
 
  0.922
PGSC0003DMT400061821
Pectinesterase (558 aa)
   
 
  0.921
PGSC0003DMT400030445
Pectinesterase (367 aa)
   
 
  0.921
PGSC0003DMT400030418
Pectinesterase (368 aa)
   
 
  0.921
PGSC0003DMT400071544
Pectinesterase (552 aa)
   
 
  0.920
PGSC0003DMT400063726
Pectinesterase (687 aa)
   
 
  0.920
PGSC0003DMT400011783
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin (559 aa)
   
 
  0.920
PGSC0003DMT400095716
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin (330 aa)
       
  0.920
PGSC0003DMT400094391
Pectinesterase (356 aa)
       
  0.920
PGSC0003DMT400094045
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin (570 aa)
       
  0.920
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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