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PGSC0003DMT400089149 PGSC0003DMT400089149 PGSC0003DMT400059650 PGSC0003DMT400059650 PGSC0003DMT400078207 PGSC0003DMT400078207 PGSC0003DMT400052983 PGSC0003DMT400052983 PGSC0003DMT400074009 PGSC0003DMT400074009 CNX5 CNX5 PGSC0003DMT400068514 PGSC0003DMT400068514 PGSC0003DMT400003320 PGSC0003DMT400003320 PGSC0003DMT400037410 PGSC0003DMT400037410 PGSC0003DMT400056100 PGSC0003DMT400056100 PGSC0003DMT400057274 PGSC0003DMT400057274
"PGSC0003DMT400003320" - Ubiquitin carrier protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
PGSC0003DMT400003320Ubiquitin carrier protein (200 aa)    
Predicted Functional Partners:
PGSC0003DMT400074009
Molybdopterin synthase sulphurylase (286 aa)
       
  0.925
CNX5
Molybdopterin synthase sulphurylase; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl-adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (-COSH) of their C-terminus. The reaction probably involves hydrogen sulfide that is gener [...] (460 aa)
       
  0.925
PGSC0003DMT400068514
Ubiquitin-activating enzyme E1 (1085 aa)
     
  0.914
PGSC0003DMT400052983
Ubiquitin-activating enzyme E1 (1091 aa)
     
  0.914
PGSC0003DMT400078207
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
     
  0.887
PGSC0003DMT400089149
Polyubiquitin (457 aa)
       
  0.878
PGSC0003DMT400059650
Ubiquitin (205 aa)
       
  0.878
PGSC0003DMT400057274
Polyubiquitin (190 aa)
       
  0.878
PGSC0003DMT400056100
Ubiquitin (207 aa)
       
  0.878
PGSC0003DMT400037410
Polyubiquitin 1 (55 aa)
       
  0.878
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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