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PGSC0003DMT400044217 PGSC0003DMT400044217 PGSC0003DMT400066960 PGSC0003DMT400066960 PGSC0003DMT400079767 PGSC0003DMT400079767 PGSC0003DMT400005932 PGSC0003DMT400005932 PGSC0003DMT400003412 PGSC0003DMT400003412 PGSC0003DMT400088617 PGSC0003DMT400088617 PGSC0003DMT400020768 PGSC0003DMT400020768 PGSC0003DMT400005922 PGSC0003DMT400005922 PGSC0003DMT400041184 PGSC0003DMT400041184 PGSC0003DMT400041179 PGSC0003DMT400041179
"PGSC0003DMT400003412" - Mitochondrial saccharopine dehydrogenase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
PGSC0003DMT400003412Mitochondrial saccharopine dehydrogenase (451 aa)    
Predicted Functional Partners:
PGSC0003DMT400088617
Saccharopine dehydrogenase family protein (430 aa)
         
  0.604
PGSC0003DMT400079767
Malate dehydrogenase (438 aa)
     
      0.568
PGSC0003DMT400066960
Malate dehydrogenase (338 aa)
     
      0.568
PGSC0003DMT400044217
Malate dehydrogenase (332 aa)
     
      0.568
PGSC0003DMT400041184
Aminoadipic semialdehyde synthase (444 aa)
         
  0.534
PGSC0003DMT400041179
Aminoadipic semialdehyde synthase (523 aa)
         
  0.534
PGSC0003DMT400005932
Aminoadipic semialdehyde synthase (204 aa)
         
  0.534
PGSC0003DMT400005922
Bifunctional lysine-ketoglutarate reductase/saccharopine dehydrogenase (271 aa)
         
  0.534
PGSC0003DMT400020768
Protein Z (390 aa)
     
 
    0.517
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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