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PGSC0003DMT400070106 PGSC0003DMT400070106 PGSC0003DMT400060907 PGSC0003DMT400060907 PGSC0003DMT400083148 PGSC0003DMT400083148 PGSC0003DMT400003453 PGSC0003DMT400003453 PGSC0003DMT400067150 PGSC0003DMT400067150 PGSC0003DMT400023981 PGSC0003DMT400023981 PGSC0003DMT400064164 PGSC0003DMT400064164
"PGSC0003DMT400003453" - Transcription factor in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400003453Transcription factor (283 aa)    
Predicted Functional Partners:
PGSC0003DMT400070106
Thioredoxin reductase (231 aa)
       
      0.517
PGSC0003DMT400060907
Thioredoxin reductase (543 aa)
       
      0.517
PGSC0003DMT400083148
Transcription factor (410 aa)
       
 
  0.502
PGSC0003DMT400064164
Transcription factor (534 aa)
       
 
  0.457
PGSC0003DMT400067150
TCP family transcription factor (327 aa)
           
  0.404
PGSC0003DMT400023981
Transcription factor (389 aa)
           
  0.404
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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