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PGSC0003DMT400054750 PGSC0003DMT400054750 PGSC0003DMT400091706 PGSC0003DMT400091706 PGSC0003DMT400075028 PGSC0003DMT400075028 PGSC0003DMT400090108 PGSC0003DMT400090108 PGSC0003DMT400078323 PGSC0003DMT400078323 PGSC0003DMT400003483 PGSC0003DMT400003483 StWIPK StWIPK PGSC0003DMT400025502 PGSC0003DMT400025502 StMPK4 StMPK4 PGSC0003DMT400074096 PGSC0003DMT400074096 PGSC0003DMT400055751 PGSC0003DMT400055751
"PGSC0003DMT400003483" - MADS-box protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400003483MADS-box protein (246 aa)    
Predicted Functional Partners:
PGSC0003DMT400025502
Glucose-6-phosphate isomerase (271 aa)
       
  0.746
PGSC0003DMT400091706
Mitogen-activated protein kinase 4 (100 aa)
     
  0.725
PGSC0003DMT400090108
Mitogen-activated protein kinase 4 (102 aa)
     
  0.725
PGSC0003DMT400078323
Big map kinase/bmk (511 aa)
     
  0.725
StWIPK
MAP kinase (373 aa)
     
  0.725
PGSC0003DMT400075028
Big map kinase/bmk (242 aa)
     
  0.725
PGSC0003DMT400074096
Big map kinase/bmk (605 aa)
     
  0.725
StMPK4
Mitogen-activated protein kinase (372 aa)
     
  0.725
PGSC0003DMT400055751
Mitogen-activated protein kinase 4 (376 aa)
     
  0.725
PGSC0003DMT400054750
Mitogen-activated protein kinase (593 aa)
     
  0.725
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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