Full Link:
STRINGSTRING
PGSC0003DMT400075403 PGSC0003DMT400075403 PGSC0003DMT400007170 PGSC0003DMT400007170 PGSC0003DMT400065103 PGSC0003DMT400065103 PGSC0003DMT400080358 PGSC0003DMT400080358 PGSC0003DMT400003507 PGSC0003DMT400003507 PGSC0003DMT400003501 PGSC0003DMT400003501 PGSC0003DMT400048091 PGSC0003DMT400048091 PGSC0003DMT400048639 PGSC0003DMT400048639 PGSC0003DMT400043929 PGSC0003DMT400043929 PGSC0003DMT400009305 PGSC0003DMT400009305 PGSC0003DMT400043013 PGSC0003DMT400043013
"PGSC0003DMT400003507" - DNA-directed RNA polymerase 2A in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400003507DNA-directed RNA polymerase 2A (255 aa)    
Predicted Functional Partners:
PGSC0003DMT400043929
Dimethyladenosine transferase (347 aa)
     
  0.708
PGSC0003DMT400009305
Dimethyladenosine transferase (388 aa)
     
  0.708
PGSC0003DMT400007170
Dimethyladenosine transferase (354 aa)
     
  0.708
PGSC0003DMT400003501
DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial (672 aa)
 
          0.608
PGSC0003DMT400080358
Transcription factor (466 aa)
         
  0.545
PGSC0003DMT400075403
Transcription factor (290 aa)
         
  0.545
PGSC0003DMT400065103
DNA-binding protein MNB1B (243 aa)
         
  0.545
PGSC0003DMT400048639
Transcription factor (379 aa)
         
  0.545
PGSC0003DMT400048091
High mobility group protein 2 HMG2 (160 aa)
         
  0.545
PGSC0003DMT400043013
High mobility group protein (233 aa)
         
  0.545
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
Server load: low (1%)