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PGSC0003DMT400066245 PGSC0003DMT400066245 PGSC0003DMT400039842 PGSC0003DMT400039842 PGSC0003DMT400064531 PGSC0003DMT400064531 PGSC0003DMT400033802 PGSC0003DMT400033802 PGSC0003DMT400003527 PGSC0003DMT400003527 PGSC0003DMT400029301 PGSC0003DMT400029301 PGSC0003DMT400011003 PGSC0003DMT400011003 PGSC0003DMT400009731 PGSC0003DMT400009731 PGSC0003DMT400012508 PGSC0003DMT400012508 PGSC0003DMT400000592 PGSC0003DMT400000592 PGSC0003DMT400021673 PGSC0003DMT400021673
"PGSC0003DMT400003527" - CFM2 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400003527CFM2 (1049 aa)    
Predicted Functional Partners:
PGSC0003DMT400029301
Endoribonuclease Dicer homolog (1914 aa)
     
 
  0.604
PGSC0003DMT400066245
Poly(A)-binding protein; Binds the poly(A) tail of mRNA (643 aa)
       
  0.602
PGSC0003DMT400064531
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA (532 aa)
       
  0.602
PGSC0003DMT400039842
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA (600 aa)
       
  0.602
PGSC0003DMT400033802
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA (608 aa)
       
  0.602
PGSC0003DMT400021673
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA (628 aa)
       
  0.602
PGSC0003DMT400012508
Polyadenylate-binding protein (124 aa)
       
  0.602
PGSC0003DMT400009731
Rrp4 (325 aa)
         
  0.526
PGSC0003DMT400000592
Exosome complex exonuclease RRP41 (243 aa)
         
  0.523
PGSC0003DMT400011003
Peptidase S8 and S53, subtilisin, kexin, sedolisin; 3 exoribonuclease (238 aa)
         
  0.513
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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