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PGSC0003DMT400075403 PGSC0003DMT400075403 PGSC0003DMT400008563 PGSC0003DMT400008563 PGSC0003DMT400076252 PGSC0003DMT400076252 PGSC0003DMT400069419 PGSC0003DMT400069419 PGSC0003DMT400039224 PGSC0003DMT400039224 PGSC0003DMT400003545 PGSC0003DMT400003545 PGSC0003DMT400068240 PGSC0003DMT400068240 PGSC0003DMT400064226 PGSC0003DMT400064226 PGSC0003DMT400046818 PGSC0003DMT400046818 PGSC0003DMT400080358 PGSC0003DMT400080358 PGSC0003DMT400048639 PGSC0003DMT400048639
"PGSC0003DMT400003545" - Paired amphipathic helix protein Sin3-like 2 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
PGSC0003DMT400003545Paired amphipathic helix protein Sin3-like 2 (512 aa)    
Predicted Functional Partners:
PGSC0003DMT400076252
Histone deacetylase (536 aa)
     
  0.965
PGSC0003DMT400069419
HDA6 (HISTONE DEACETYLASE 6); histone deacetylase (471 aa)
     
  0.965
PGSC0003DMT400068240
Histone deacetylase (397 aa)
     
  0.965
PGSC0003DMT400046818
Histone deacetylase (456 aa)
     
  0.965
PGSC0003DMT400039224
Zinc finger protein (1251 aa)
     
  0.945
PGSC0003DMT400064226
Chromatin binding protein (386 aa)
       
  0.945
PGSC0003DMT400008563
Chromatin binding protein (227 aa)
       
  0.945
PGSC0003DMT400080358
Transcription factor (466 aa)
     
  0.945
PGSC0003DMT400075403
Transcription factor (290 aa)
     
  0.945
PGSC0003DMT400048639
Transcription factor (379 aa)
     
  0.945
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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