Full Link:
STRINGSTRING
PGSC0003DMT400064351 PGSC0003DMT400064351 PGSC0003DMT400017488 PGSC0003DMT400017488 PGSC0003DMT400047155 PGSC0003DMT400047155 PGSC0003DMT400068359 PGSC0003DMT400068359 PGSC0003DMT400057785 PGSC0003DMT400057785 PGSC0003DMT400064191 PGSC0003DMT400064191 PGSC0003DMT400004353 PGSC0003DMT400004353 PGSC0003DMT400003579 PGSC0003DMT400003579 PGSC0003DMT400018024 PGSC0003DMT400018024 PGSC0003DMT400045723 PGSC0003DMT400045723 PGSC0003DMT400046987 PGSC0003DMT400046987
"PGSC0003DMT400003579" - Structure-specific recognition protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400003579Structure-specific recognition protein (639 aa)    
Predicted Functional Partners:
PGSC0003DMT400064351
Global transcription factor group (1060 aa)
     
  0.995
PGSC0003DMT400047155
Global transcription factor group (1067 aa)
     
  0.995
PGSC0003DMT400046987
Global transcription factor group (1051 aa)
     
  0.995
PGSC0003DMT400045723
Global transcription factor group (823 aa)
     
  0.995
PGSC0003DMT400017488
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1487 aa)
     
 
  0.984
PGSC0003DMT400057785
RNA polymerase-associated protein RTF1 (652 aa)
     
  0.983
PGSC0003DMT400064191
Protein kinase CK2 alpha subunit (333 aa)
     
  0.976
PGSC0003DMT400068359
Protein kinase Ck2 regulatory subunit 2; Plays a complex role in regulating the basal catalytic activity of the alpha subunit (285 aa)
     
  0.962
PGSC0003DMT400018024
Protein kinase 2 beta chain; Plays a complex role in regulating the basal catalytic activity of the alpha subunit (309 aa)
     
  0.962
PGSC0003DMT400004353
Protein kinase Ck2 regulatory subunit 2; Plays a complex role in regulating the basal catalytic activity of the alpha subunit (291 aa)
     
  0.962
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
Server load: low (1%)