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PGSC0003DMT400054361 PGSC0003DMT400054361 PGSC0003DMT400022579 PGSC0003DMT400022579 PGSC0003DMT400083256 PGSC0003DMT400083256 PGSC0003DMT400081324 PGSC0003DMT400081324 PGSC0003DMT400070814 PGSC0003DMT400070814 PGSC0003DMT400061975 PGSC0003DMT400061975 PGSC0003DMT400046201 PGSC0003DMT400046201 PGSC0003DMT400003592 PGSC0003DMT400003592 PGSC0003DMT400048132 PGSC0003DMT400048132 PGSC0003DMT400035383 PGSC0003DMT400035383 PGSC0003DMT400005838 PGSC0003DMT400005838
"PGSC0003DMT400003592" - 60S ribosomal protein L34 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT40000359260S ribosomal protein L34 (120 aa)    
Predicted Functional Partners:
PGSC0003DMT400081324
Ribosomal protein L19 (220 aa)
   
  0.999
PGSC0003DMT400046201
Ribosomal protein L19 (214 aa)
   
  0.999
PGSC0003DMT400054361
Ly200 (76 aa)
   
  0.999
PGSC0003DMT400035383
Ly200 (378 aa)
   
  0.999
PGSC0003DMT400022579
Ly200 protein (133 aa)
   
  0.999
PGSC0003DMT400005838
Ly200 (133 aa)
   
  0.999
PGSC0003DMT400070814
60S ribosomal protein L30 (113 aa)
     
  0.998
PGSC0003DMT400061975
Xyloglucan endotransglycosylase (488 aa)
     
  0.998
PGSC0003DMT400048132
Ribosomal protein L30e (112 aa)
     
  0.998
PGSC0003DMT400083256
60S ribosomal protein L15 (204 aa)
     
  0.998
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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