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PGSC0003DMT400075574 PGSC0003DMT400075574 PGSC0003DMT400078394 PGSC0003DMT400078394 PGSC0003DMT400010280 PGSC0003DMT400010280 PGSC0003DMT400008347 PGSC0003DMT400008347 PGSC0003DMT400055636 PGSC0003DMT400055636 PGSC0003DMT400038558 PGSC0003DMT400038558 PGSC0003DMT400063701 PGSC0003DMT400063701 PGSC0003DMT400029666 PGSC0003DMT400029666 PGSC0003DMT400037966 PGSC0003DMT400037966 PTB7 PTB7 PGSC0003DMT400074732 PGSC0003DMT400074732
"PTB7" - Polypyrimidine tract-binding protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTB7Polypyrimidine tract-binding protein (467 aa)    
Predicted Functional Partners:
PGSC0003DMT400010280
RNA-binding protein (371 aa)
     
  0.708
PGSC0003DMT400008347
Pre-mRNA splicing factor (321 aa)
     
  0.706
PGSC0003DMT400055636
U1 small nuclear ribonucleoprotein 70 kD (352 aa)
     
  0.702
PGSC0003DMT400038558
U1 small nuclear ribonucleoprotein 70 kDa (475 aa)
     
  0.702
PGSC0003DMT400063701
Arginine/serine-rich splicing factor (330 aa)
     
  0.702
PGSC0003DMT400037966
Arginine/serine-rich splicing factor (292 aa)
     
  0.702
PGSC0003DMT400029666
Pre-mRNA-splicing factor SF2 (315 aa)
     
  0.702
PGSC0003DMT400078394
Poly(A) polymerase alpha (709 aa)
     
 
  0.691
PGSC0003DMT400075574
Poly(A) polymerase beta (606 aa)
     
 
  0.691
PGSC0003DMT400074732
Poly(A) polymerase (499 aa)
     
 
  0.691
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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