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PGSC0003DMT400073440 PGSC0003DMT400073440 PGSC0003DMT400018140 PGSC0003DMT400018140 PGSC0003DMT400056692 PGSC0003DMT400056692 PGSC0003DMT400033173 PGSC0003DMT400033173 PGSC0003DMT400034298 PGSC0003DMT400034298 PGSC0003DMT400003781 PGSC0003DMT400003781 PGSC0003DMT400033182 PGSC0003DMT400033182 PGSC0003DMT400033184 PGSC0003DMT400033184 PGSC0003DMT400065020 PGSC0003DMT400065020 PGSC0003DMT400000320 PGSC0003DMT400000320 PGSC0003DMT400029163 PGSC0003DMT400029163
"PGSC0003DMT400003781" - Ras-GTPase-activating protein-binding protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400003781Ras-GTPase-activating protein-binding protein (469 aa)    
Predicted Functional Partners:
PGSC0003DMT400034298
Ubiquitin carboxyl-terminal hydrolase (534 aa)
     
 
  0.955
PGSC0003DMT400033184
Ubiquitin carboxyl-terminal hydrolase (183 aa)
     
 
  0.955
PGSC0003DMT400033182
Ubiquitin carboxyl-terminal hydrolase (141 aa)
     
 
  0.955
PGSC0003DMT400033173
Ubiquitin carboxyl-terminal hydrolase (355 aa)
     
 
  0.955
PGSC0003DMT400056692
ATP-dependent RNA helicase (1141 aa)
     
 
  0.916
PGSC0003DMT400073440
Eukaryotic translation initiation factor 3 subunit (656 aa)
     
 
  0.724
PGSC0003DMT400065020
Eukaryotic translation initiation factor 3 subunit (607 aa)
     
 
  0.724
PGSC0003DMT400029163
Eukaryotic translation initiation factor 3 subunit (851 aa)
     
 
  0.724
PGSC0003DMT400018140
Tetratricopeptide repeat (TPR)-containing protein (808 aa)
     
 
  0.724
PGSC0003DMT400000320
Eukaryotic translation initiation factor 3 subunit (748 aa)
     
 
  0.724
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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