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PGSC0003DMT400079455 PGSC0003DMT400079455 PGSC0003DMT400093069 PGSC0003DMT400093069 PGSC0003DMT400022674 PGSC0003DMT400022674 PGSC0003DMT400084495 PGSC0003DMT400084495 PGSC0003DMT400040392 PGSC0003DMT400040392 PGSC0003DMT400043119 PGSC0003DMT400043119 PGSC0003DMT400037705 PGSC0003DMT400037705 PGSC0003DMT400017646 PGSC0003DMT400017646 PGSC0003DMT400003819 PGSC0003DMT400003819 PGSC0003DMT400036835 PGSC0003DMT400036835 PGSC0003DMT400036011 PGSC0003DMT400036011
"PGSC0003DMT400003819" - 50S robosomal protein L11 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT40000381950S robosomal protein L11 (155 aa)    
Predicted Functional Partners:
PGSC0003DMT400017646
Ribosomal protein (341 aa)
 
  0.999
PGSC0003DMT400022674
Ribosomal protein large subunit 2 (229 aa)
   
  0.999
PGSC0003DMT400043119
60S ribosomal protein L10, mitochondrial (282 aa)
   
  0.999
PGSC0003DMT400037705
50S ribosomal protein L15 (276 aa)
   
  0.999
PGSC0003DMT400093069
Ribosomal protein L16 (110 aa)
   
  0.999
PGSC0003DMT400079455
Ribosomal protein L16 (147 aa)
   
  0.999
PGSC0003DMT400036011
Ribosomal protein L16 (53 aa)
   
  0.999
PGSC0003DMT400084495
50S ribosomal protein L22 (166 aa)
   
  0.999
PGSC0003DMT400036835
50S ribosomal protein L3 (304 aa)
 
  0.999
PGSC0003DMT400040392
Gene of unknown function (280 aa)
 
  0.999
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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