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PGSC0003DMT400009982 PGSC0003DMT400009982 PGSC0003DMT400076175 PGSC0003DMT400076175 PGSC0003DMT400040876 PGSC0003DMT400040876 PGSC0003DMT400056247 PGSC0003DMT400056247 PGSC0003DMT400001017 PGSC0003DMT400001017 PGSC0003DMT400053145 PGSC0003DMT400053145 PGSC0003DMT400011792 PGSC0003DMT400011792 PGSC0003DMT400014020 PGSC0003DMT400014020 PGSC0003DMT400049359 PGSC0003DMT400049359 PGSC0003DMT400003872 PGSC0003DMT400003872 PGSC0003DMT400022054 PGSC0003DMT400022054
"PGSC0003DMT400003872" - AMP dependent ligase in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400003872AMP dependent ligase (553 aa)    
Predicted Functional Partners:
PGSC0003DMT400014020
Multifunctional protein (721 aa)
   
  0.899
PGSC0003DMT400011792
Glyoxysomal fatty acid beta-oxidation multifunctional protein (727 aa)
   
  0.899
PGSC0003DMT400009982
Multifunctional protein (712 aa)
   
  0.899
PGSC0003DMT400001017
3-hydroxyacyl-CoA dehyrogenase (724 aa)
   
  0.899
PGSC0003DMT400022054
Homomeric Acetyl-CoA Carboxylase (Hom-ACCase) (2267 aa)
   
 
  0.809
PGSC0003DMT400076175
3-ketoacyl CoA thiolase 2 (465 aa)
   
 
  0.770
PGSC0003DMT400040876
3-ketoacyl CoA thiolase 1 (456 aa)
   
 
  0.770
PGSC0003DMT400056247
Acyl-CoA oxidase ACX3 (288 aa)
   
 
  0.689
PGSC0003DMT400053145
Acyl-coenzyme A oxidase 2, peroxisomal (693 aa)
   
 
  0.689
PGSC0003DMT400049359
Acyl-CoA dehydrogenase (439 aa)
   
 
  0.689
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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