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PGSC0003DMT400061466 PGSC0003DMT400061466 PGSC0003DMT400091189 PGSC0003DMT400091189 PGSC0003DMT400077106 PGSC0003DMT400077106 PGSC0003DMT400084876 PGSC0003DMT400084876 PGSC0003DMT400081719 PGSC0003DMT400081719 PGSC0003DMT400003929 PGSC0003DMT400003929 PGSC0003DMT400078356 PGSC0003DMT400078356 PGSC0003DMT400060438 PGSC0003DMT400060438 PGSC0003DMT400069337 PGSC0003DMT400069337 PGSC0003DMT400069344 PGSC0003DMT400069344 PGSC0003DMT400062852 PGSC0003DMT400062852
"PGSC0003DMT400003929" - Lipase class 3 family protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400003929Lipase class 3 family protein (385 aa)    
Predicted Functional Partners:
PGSC0003DMT400091189
ATP-binding cassette transporter (84 aa)
           
  0.408
PGSC0003DMT400084876
White-brown-complex ABC transporter family (729 aa)
           
  0.408
PGSC0003DMT400081719
White-brown-complex ABC transporter family (51 aa)
           
  0.408
PGSC0003DMT400078356
Abc transporter (723 aa)
           
  0.408
PGSC0003DMT400077106
ATP-binding cassette transporter (682 aa)
           
  0.408
PGSC0003DMT400069344
White-brown-complex ABC transporter family (282 aa)
           
  0.408
PGSC0003DMT400069337
White-brown-complex ABC transporter family (656 aa)
           
  0.408
PGSC0003DMT400062852
ATP-binding cassette transporter (661 aa)
           
  0.408
PGSC0003DMT400061466
ATP-binding cassette transporter (741 aa)
           
  0.408
PGSC0003DMT400060438
ATP-binding cassette transporter (724 aa)
           
  0.408
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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