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PGSC0003DMT400031803 PGSC0003DMT400031803 PGSC0003DMT400014927 PGSC0003DMT400014927 PGSC0003DMT400075356 PGSC0003DMT400075356 PGSC0003DMT400004320 PGSC0003DMT400004320 PGSC0003DMT400063219 PGSC0003DMT400063219 PGSC0003DMT400083964 PGSC0003DMT400083964 PGSC0003DMT400039400 PGSC0003DMT400039400 PGSC0003DMT400040232 PGSC0003DMT400040232 PGSC0003DMT400049857 PGSC0003DMT400049857
"PGSC0003DMT400004320" - ATPUP11 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400004320ATPUP11 (369 aa)    
Predicted Functional Partners:
PGSC0003DMT400039400
Purine permease (539 aa)
           
  0.515
PGSC0003DMT400031803
Potassium channel tetramerization domain-containing protein (463 aa)
           
  0.501
PGSC0003DMT400014927
Potassium channel tetramerization domain-containing protein (472 aa)
           
  0.501
PGSC0003DMT400083964
Dehydrogenase (429 aa)
           
  0.499
PGSC0003DMT400075356
Organic anion transporter (342 aa)
           
  0.406
PGSC0003DMT400063219
Permease I (525 aa)
           
  0.406
PGSC0003DMT400049857
Permease I (532 aa)
           
  0.406
PGSC0003DMT400040232
Purine permease (533 aa)
           
  0.406
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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