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PGSC0003DMT400094534 PGSC0003DMT400094534 PGSC0003DMT400091100 PGSC0003DMT400091100 PGSC0003DMT400090149 PGSC0003DMT400090149 PGSC0003DMT400022054 PGSC0003DMT400022054 PGSC0003DMT400004338 PGSC0003DMT400004338 PGSC0003DMT400083218 PGSC0003DMT400083218 PGSC0003DMT400000836 PGSC0003DMT400000836 PGSC0003DMT400082796 PGSC0003DMT400082796 PGSC0003DMT400081764 PGSC0003DMT400081764 PGSC0003DMT400078867 PGSC0003DMT400078867 PGSC0003DMT400078131 PGSC0003DMT400078131
"PGSC0003DMT400004338" - ATP binding protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400004338ATP binding protein (430 aa)    
Predicted Functional Partners:
PGSC0003DMT400022054
Homomeric Acetyl-CoA Carboxylase (Hom-ACCase) (2267 aa)
   
  0.977
PGSC0003DMT400000836
Protein cbxX, chromosomal (483 aa)
   
  0.813
PGSC0003DMT400083218
Aspartate kinase (922 aa)
       
 
  0.710
PGSC0003DMT400094534
Protein phosphatase 2C 51 (200 aa)
   
  0.710
PGSC0003DMT400091100
Protein phosphatase 2c (342 aa)
   
  0.710
PGSC0003DMT400090149
Protein phosphatase 2c (332 aa)
   
  0.710
PGSC0003DMT400082796
Protein phosphatase 2c (286 aa)
   
  0.710
PGSC0003DMT400081764
Protein phosphatase 2c (414 aa)
   
  0.710
PGSC0003DMT400078867
DNA-binding protein phosphatase 2C (383 aa)
   
  0.710
PGSC0003DMT400078131
Protein phosphatase 2C 51 (313 aa)
   
  0.710
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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