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PGSC0003DMT400014982 PGSC0003DMT400014982 PGSC0003DMT400074098 PGSC0003DMT400074098 PGSC0003DMT400004433 PGSC0003DMT400004433 PGSC0003DMT400045666 PGSC0003DMT400045666 PGSC0003DMT400022057 PGSC0003DMT400022057 PGSC0003DMT400014742 PGSC0003DMT400014742 PGSC0003DMT400062960 PGSC0003DMT400062960 PGSC0003DMT400038351 PGSC0003DMT400038351 PGSC0003DMT400031631 PGSC0003DMT400031631
"PGSC0003DMT400004433" - Calmodulin binding protein in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400004433Calmodulin binding protein (480 aa)    
Predicted Functional Partners:
PGSC0003DMT400045666
Heat shock protein binding protein (545 aa)
     
 
  0.528
PGSC0003DMT400022057
Heat shock protein binding protein (437 aa)
     
 
  0.528
PGSC0003DMT400038351
Calmodulin (163 aa)
           
  0.515
PGSC0003DMT400062960
Kinesin light chain (730 aa)
     
 
  0.498
PGSC0003DMT400031631
Kinesin light chain (601 aa)
     
 
  0.419
PGSC0003DMT400014982
Kinesin light chain (605 aa)
     
 
  0.419
PGSC0003DMT400074098
Calcium-binding allergen Ole e 8 (154 aa)
           
  0.403
PGSC0003DMT400014742
Calcium-binding allergen Ole e 8 (164 aa)
           
  0.403
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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