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PGSC0003DMT400014846 PGSC0003DMT400014846 PGSC0003DMT400077674 PGSC0003DMT400077674 PGSC0003DMT400053253 PGSC0003DMT400053253 PGSC0003DMT400047916 PGSC0003DMT400047916 PGSC0003DMT400042449 PGSC0003DMT400042449 PGSC0003DMT400004493 PGSC0003DMT400004493 PGSC0003DMT400000836 PGSC0003DMT400000836 PGSC0003DMT400078855 PGSC0003DMT400078855 PGSC0003DMT400042203 PGSC0003DMT400042203 PGSC0003DMT400031920 PGSC0003DMT400031920 PGSC0003DMT400027685 PGSC0003DMT400027685
"PGSC0003DMT400004493" - Conserved gene of unknown function in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400004493Conserved gene of unknown function (86 aa)    
Predicted Functional Partners:
PGSC0003DMT400042449
Derlin-2; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (245 aa)
     
  0.974
PGSC0003DMT400078855
Protein OS-9 (314 aa)
     
  0.973
PGSC0003DMT400031920
Fas-associated factor 1 (465 aa)
     
 
  0.939
PGSC0003DMT400014846
Fas-associated factor 1 (466 aa)
     
 
  0.939
PGSC0003DMT400053253
Binding protein (283 aa)
     
  0.913
PGSC0003DMT400047916
F-box family protein (349 aa)
     
  0.913
PGSC0003DMT400042203
F-box protein (356 aa)
     
  0.913
PGSC0003DMT400027685
DUF593-containing protein 2 (312 aa)
     
  0.913
PGSC0003DMT400077674
Protein cbxX, chromosomal (479 aa)
     
  0.906
PGSC0003DMT400000836
Protein cbxX, chromosomal (483 aa)
     
  0.906
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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