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PGSC0003DMT400020987 PGSC0003DMT400020987 PGSC0003DMT400080258 PGSC0003DMT400080258 PGSC0003DMT400094317 PGSC0003DMT400094317 PGSC0003DMT400004655 PGSC0003DMT400004655 PGSC0003DMT400088088 PGSC0003DMT400088088 PGSC0003DMT400011821 PGSC0003DMT400011821 PGSC0003DMT400025666 PGSC0003DMT400025666 PGSC0003DMT400056932 PGSC0003DMT400056932 PGSC0003DMT400087294 PGSC0003DMT400087294 PGSC0003DMT400085202 PGSC0003DMT400085202 Pot82 Pot82
"PGSC0003DMT400004655" - Dynamin in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400004655Dynamin (610 aa)    
Predicted Functional Partners:
PGSC0003DMT400025666
Calcium ion binding protein (162 aa)
     
  0.849
PGSC0003DMT400080258
Binding protein (170 aa)
       
 
  0.774
PGSC0003DMT400020987
Protein kinase (167 aa)
       
 
  0.774
PGSC0003DMT400011821
Binding protein (167 aa)
       
 
  0.774
PGSC0003DMT400056932
Leucine rich repeat-type serine/threonine receptor-like kinase (1192 aa)
   
  0.704
PGSC0003DMT400094317
Actin-11 (148 aa)
     
  0.674
PGSC0003DMT400088088
Actin (194 aa)
     
  0.674
PGSC0003DMT400087294
Actin, cytoplasmic 2-like isoform 2 (274 aa)
     
  0.674
PGSC0003DMT400085202
Actin 1 (149 aa)
     
  0.674
Pot82
Actin (377 aa)
     
  0.674
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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