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PGSC0003DMT400080722 PGSC0003DMT400080722 PGSC0003DMT400017691 PGSC0003DMT400017691 PGSC0003DMT400031762 PGSC0003DMT400031762 PGSC0003DMT400055713 PGSC0003DMT400055713 PGSC0003DMT400052749 PGSC0003DMT400052749 PGSC0003DMT400070039 PGSC0003DMT400070039 PGSC0003DMT400004792 PGSC0003DMT400004792 PGSC0003DMT400005591 PGSC0003DMT400005591 PGSC0003DMT400028324 PGSC0003DMT400028324
"PGSC0003DMT400004792" - Alpha-expansin 8 in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
PGSC0003DMT400004792Alpha-expansin 8 (256 aa)    
Predicted Functional Partners:
PGSC0003DMT400028324
Xyloglucan endotransglycosylase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (295 aa)
     
   
  0.528
PGSC0003DMT400005591
Xyloglucan endotransglucosylase/hydrolase 5; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (296 aa)
     
   
  0.528
PGSC0003DMT400080722
Polygalacturonase (460 aa)
           
  0.408
PGSC0003DMT400070039
Dehiscence polygalacturonase (410 aa)
           
  0.408
PGSC0003DMT400055713
Polygalacturonase (458 aa)
           
  0.408
PGSC0003DMT400052749
Endo-1,4-beta-glucanase (486 aa)
           
  0.408
PGSC0003DMT400031762
Endo-1,4-beta-glucanase (502 aa)
           
  0.408
PGSC0003DMT400017691
Polygalacturonase (351 aa)
           
  0.408
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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