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PGSC0003DMT400066844 PGSC0003DMT400066844 PGSC0003DMT400016774 PGSC0003DMT400016774 PGSC0003DMT400042221 PGSC0003DMT400042221 PGSC0003DMT400050242 PGSC0003DMT400050242 PGSC0003DMT400072570 PGSC0003DMT400072570 PGSC0003DMT400080300 PGSC0003DMT400080300 PGSC0003DMT400066842 PGSC0003DMT400066842 PGSC0003DMT400004986 PGSC0003DMT400004986 PGSC0003DMT400046788 PGSC0003DMT400046788
"PGSC0003DMT400004986" - Pla2g4b in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400004986Pla2g4b (379 aa)    
Predicted Functional Partners:
PGSC0003DMT400072570
HVA22 i (160 aa)
           
  0.491
PGSC0003DMT400042221
HVA22 i (224 aa)
           
  0.491
PGSC0003DMT400080300
Methyltransferase (612 aa)
           
  0.487
PGSC0003DMT400066844
Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues (118 aa)
           
  0.487
PGSC0003DMT400066842
Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues (115 aa)
           
  0.487
PGSC0003DMT400050242
ATP binding protein (616 aa)
           
  0.487
PGSC0003DMT400016774
Methyltransferase (612 aa)
           
  0.487
PGSC0003DMT400046788
Transcription factor (341 aa)
           
  0.407
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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