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PGSC0003DMT400070801 PGSC0003DMT400070801 PGSC0003DMT400095279 PGSC0003DMT400095279 PGSC0003DMT400077747 PGSC0003DMT400077747 PGSC0003DMT400093225 PGSC0003DMT400093225 PGSC0003DMT400083734 PGSC0003DMT400083734 PGSC0003DMT400004999 PGSC0003DMT400004999 PGSC0003DMT400083474 PGSC0003DMT400083474 PGSC0003DMT400047241 PGSC0003DMT400047241 PGSC0003DMT400072292 PGSC0003DMT400072292 PGSC0003DMT400072554 PGSC0003DMT400072554 CDPK CDPK
"PGSC0003DMT400004999" - Regulator of gene silencing in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400004999Regulator of gene silencing (101 aa)    
Predicted Functional Partners:
PGSC0003DMT400047241
Two pore calcium channel protein 1A (203 aa)
       
 
  0.912
PGSC0003DMT400095279
Calcium-dependent protein kinase (175 aa)
       
  0.824
PGSC0003DMT400093225
Conserved gene of unknown function (199 aa)
       
  0.824
PGSC0003DMT400083734
Calcium-dependent protein kinase (457 aa)
       
  0.824
PGSC0003DMT400083474
Calcium-dependent protein kinase 8 (532 aa)
       
  0.824
PGSC0003DMT400077747
Calcium dependent protein kinase 13 (96 aa)
       
  0.824
PGSC0003DMT400072554
Calcium-dependent protein kinase CDPK12 (607 aa)
       
  0.824
PGSC0003DMT400072292
Calcium-dependent protein kinase (638 aa)
       
  0.824
CDPK
Calcium dependant protein kinase (509 aa)
       
  0.824
PGSC0003DMT400070801
CCaMK (515 aa)
       
  0.824
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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