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PGSC0003DMT400077799 PGSC0003DMT400077799 PGSC0003DMT400093064 PGSC0003DMT400093064 PGSC0003DMT400088635 PGSC0003DMT400088635 PGSC0003DMT400089514 PGSC0003DMT400089514 PGSC0003DMT400083133 PGSC0003DMT400083133 PGSC0003DMT400005207 PGSC0003DMT400005207 PGSC0003DMT400083177 PGSC0003DMT400083177 PGSC0003DMT400022803 PGSC0003DMT400022803 PGSC0003DMT400080452 PGSC0003DMT400080452 PGSC0003DMT400082762 PGSC0003DMT400082762 PGSC0003DMT400078221 PGSC0003DMT400078221
"PGSC0003DMT400005207" - Peptidase aspartic, active site in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400005207Peptidase aspartic, active site (731 aa)    
Predicted Functional Partners:
PGSC0003DMT400022803
5-oxoprolinase (1268 aa)
           
  0.513
PGSC0003DMT400093064
Peptide transporter (570 aa)
     
 
  0.415
PGSC0003DMT400089514
Peptide transporter (619 aa)
     
 
  0.415
PGSC0003DMT400088635
Nitrate transporter (347 aa)
     
 
  0.415
PGSC0003DMT400083177
Nitrate transporter (187 aa)
     
 
  0.415
PGSC0003DMT400083133
Nitrate transporter NRT1-2 (153 aa)
     
 
  0.415
PGSC0003DMT400082762
Proton-dependent oligopeptide transport family protein (452 aa)
     
 
  0.415
PGSC0003DMT400080452
Oligopeptide transporter (568 aa)
     
 
  0.415
PGSC0003DMT400078221
Peptide transporter (574 aa)
     
 
  0.415
PGSC0003DMT400077799
Nitrate transporter (195 aa)
     
 
  0.415
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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