Full Link:
close STRING Website Improvement Campaign
deny allow Over the next 24 hours, we are collecting usage information on the web-interface (learn more).   Do you allow anonymous tracking of your activity ?
STRINGSTRING
PGSC0003DMT400016769 PGSC0003DMT400016769 RANGAP1 RANGAP1 PGSC0003DMT400078306 PGSC0003DMT400078306 PGSC0003DMT400005265 PGSC0003DMT400005265 PGSC0003DMT400050414 PGSC0003DMT400050414 PGSC0003DMT400016576 PGSC0003DMT400016576 PGSC0003DMT400047662 PGSC0003DMT400047662 PGSC0003DMT400040678 PGSC0003DMT400040678 PGSC0003DMT400076528 PGSC0003DMT400076528 PGSC0003DMT400068505 PGSC0003DMT400068505 RANGAP2 RANGAP2
"PGSC0003DMT400005265" - Nuclear transport factor in Solanum tuberosum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGSC0003DMT400005265Nuclear transport factor (125 aa)    
Predicted Functional Partners:
PGSC0003DMT400078306
GTP-binding nuclear protein Ran-1; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (230 aa)
     
  0.968
PGSC0003DMT400076528
GTP-binding nuclear protein Ran2; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (221 aa)
     
  0.968
PGSC0003DMT400016576
GTP-binding nuclear protein Ran1; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (221 aa)
     
  0.968
PGSC0003DMT400040678
Nuclear import protein mog1 (82 aa)
       
 
  0.779
PGSC0003DMT400016769
Nuclear import protein mog1 (203 aa)
       
 
  0.779
PGSC0003DMT400068505
Importin beta-1 (873 aa)
       
  0.735
PGSC0003DMT400050414
Importin beta-1 (868 aa)
       
  0.735
PGSC0003DMT400047662
Importin beta-1 (871 aa)
       
  0.735
RANGAP1
Ran GTPase-activating protein 1 (534 aa)
         
  0.645
RANGAP2
Ran GTPase-activating protein 2 (553 aa)
         
  0.645
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
Server load: low (2%)